Public Sigenae Contig Browser Salmon-Trout VennView

                
Based on Ensembl release 40 - Aug 2006
 

GO Slim Generic Ontology

Venn diagrams are diagrams that show all hypothetically possible logical relations between a finite collection of pools

Define up to five GO Slim classes pools by selecting one or more classes in each «Pool» column and click on Continue button

GO Slim Classes Pool 1 Pool 2 Pool 3 Pool 4 Pool 5
$biological_process ; GO:0008150
  <anatomical structure morphogenesis ; GO:0009653
  %behavior ; GO:0007610
  %cell communication ; GO:0007154
    %cell-cell signaling ; GO:0007267
  %cell cycle ; GO:0007049
  %cell differentiation ; GO:0030154
  <cell growth ; GO:0016049 % growth ; GO:0040007
  %cell proliferation ; GO:0008283
  %cell recognition ; GO:0008037
  %cellular component organization ; GO:0016043
    %cytoplasm organization ; GO:0007028
    %organelle organization ; GO:0006996
      %cytoskeleton organization ; GO:0007010
      %mitochondrion organization ; GO:0007005
  %cellular homeostasis ; GO:0019725
  %death ; GO:0016265
    %cell death ; GO:0008219
  %embryonic development ; GO:0009790 < multicellular organismal development ; GO:0007275
  %growth ; GO:0040007
  %metabolic process ; GO:0008152
    %biosynthetic process ; GO:0009058
    %catabolic process ; GO:0009056
    %generation of precursor metabolites and energy ; GO:0006091
    %primary metabolic process ; GO:0044238
      %carbohydrate metabolic process ; GO:0005975
      %cellular amino acid and derivative metabolic process ; GO:0006519
      %lipid metabolic process ; GO:0006629
      %nucleobase, nucleoside, nucleotide and nucleic acid metabolic process ; GO:0006139
        %DNA metabolic process ; GO:0006259
      %protein metabolic process ; GO:0019538
        %protein modification process ; GO:0006464
    @regulates:regulation of gene expression, epigenetic ; GO:0040029 % regulation of biological process
    %secondary metabolic process ; GO:0019748
  %multicellular organismal development ; GO:0007275
  @regulates:regulation of biological process ; GO:0050789
  %reproduction ; GO:0000003
  %response to abiotic stimulus ; GO:0009628
  %response to biotic stimulus ; GO:0009607
  %response to endogenous stimulus ; GO:0009719
  %response to external stimulus ; GO:0009605
  %response to stress ; GO:0006950
  <signal transduction ; GO:0007165 % regulation of biological process ; GO:0050789
  %symbiosis, encompassing mutualism through parasitism ; GO:0044403
  %transcription ; GO:0006350 % biosynthetic process ; GO:0009058 < metabolic process
  %translation ; GO:0006412 % biosynthetic process ; GO:0009058 < metabolic process
  <transport ; GO:0006810
    %ion transport ; GO:0006811
    %protein transport ; GO:0015031
  %viral reproduction ; GO:0016032
$cellular_component ; GO:0005575
  %cell ; GO:0005623
  %cell envelope ; GO:0030313 < cell ; GO:0005623
  %cilium ; GO:0005929 < cell ; GO:0005623
  %cytoplasm ; GO:0005737 < intracellular ; GO:0005622
    <cytoplasmic chromosome ; GO:0000229 % chromosome ; GO:0005694
    <cytoplasmic membrane-bounded vesicle ; GO:0016023 % organelle ; GO:0043226
    <endoplasmic reticulum ; GO:0005783 % organelle ; GO:0043226
    <endosome ; GO:0005768 % organelle ; GO:0043226
    <Golgi apparatus ; GO:0005794 % organelle ; GO:0043226
    <mitochondrion ; GO:0005739 % organelle ; GO:0043226
    <peroxisome ; GO:0005777 % organelle ; GO:0043226
    <plastid ; GO:0009536 % organelle ; GO:0043226
    <ribosome ; GO:0005840 % organelle ; GO:0043226
    <vacuole ; GO:0005773 % organelle ; GO:0043226
      %lysosome ; GO:0005764
  %cytosol ; GO:0005829 < cytoplasm ; GO:0005737
  %external encapsulating structure ; GO:0030312 < cell ; GO:0005623
    %cell wall ; GO:0005618
  %extracellular region ; GO:0005576
  %extracellular space ; GO:0005615 < extracellular region ; GO:0005576
  %intracellular ; GO:0005622 < cell ; GO:0005623
    <chromosome ; GO:0005694 % organelle ; GO:0043226
      %nuclear chromosome ; GO:0000228 < nucleus ; GO:0005634
    <cytoskeleton ; GO:0005856 % organelle ; GO:0043226
    <nucleus ; GO:0005634 % organelle ; GO:0043226
      <nucleolus ; GO:0005730 % organelle ; GO:0043226
  %lipid particle ; GO:0005811 < cytoplasm ; GO:0005737
  %microtubule organizing center ; GO:0005815 < cytoskeleton ; GO:0005856 < cytoplasm ; GO:0005737
  %nuclear envelope ; GO:0005635 < nucleus ; GO:0005634
  %nucleoplasm ; GO:0005654 < nucleus ; GO:0005634
  %organelle ; GO:0043226
  %plasma membrane ; GO:0005886 < cell ; GO:0005623
  %protein complex ; GO:0043234
  %proteinaceous extracellular matrix ; GO:0005578 < extracellular region ; GO:0005576
  %thylakoid ; GO:0009579 < intracellular ; GO:0005622
$molecular_function ; GO:0003674
  %antioxidant activity ; GO:0016209
  %binding ; GO:0005488
    %calcium ion binding ; GO:0005509
    %carbohydrate binding ; GO:0030246
    %chromatin binding ; GO:0003682
    %lead ion binding ; GO:0032791
    %lipid binding ; GO:0008289
    %nucleic acid binding ; GO:0003676
      %DNA binding ; GO:0003677
        %transcription factor activity ; GO:0003700 % transcription regulator activity
      %RNA binding ; GO:0003723
      %translation factor activity, nucleic acid binding ; GO:0008135
    %nucleotide binding ; GO:0000166
    %oxygen binding ; GO:0019825
    %protein binding ; GO:0005515
      %cytoskeletal protein binding ; GO:0008092
        %actin binding ; GO:0003779
      %receptor binding ; GO:0005102
    %triplet codon-amino acid adaptor activity ; GO:0030533 % RNA binding ; GO:0003723
  %catalytic activity ; GO:0003824
    %hydrolase activity ; GO:0016787
      %motor activity ; GO:0003774
      %nuclease activity ; GO:0004518
      %peptidase activity ; GO:0008233
      %phosphoprotein phosphatase activity ; GO:0004721
    %transferase activity ; GO:0016740
      %kinase activity ; GO:0016301
        %protein kinase activity ; GO:0004672
  %electron carrier activity ; GO:0009055
  %enzyme regulator activity ; GO:0030234
  %nutrient reservoir activity ; GO:0045735
  %protein tag ; GO:0031386
  %signal transducer activity ; GO:0004871
    %receptor activity ; GO:0004872
  %structural molecule activity ; GO:0005198
  %transcription regulator activity ; GO:0030528
  %translation regulator activity ; GO:0045182
  %transporter activity ; GO:0005215
    %ion channel activity ; GO:0005216
    %neurotransmitter transporter activity ; GO:0005326
 

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