Public Sigenae Contig Browser Trout VennView

                
Based on Ensembl release 40 - Aug 2006
 

Trout EST Libraries

Venn diagrams are diagrams that show all hypothetically possible logical relations between a finite collection of pools

Define up to five library pools by selecting one or more libraries in each «Pool» column and click on Continue button

Discard singlets

Uncheck below checkboxes to include singlets in analysis of different pools.
Organ / Tissue / Cell type Lib. name Dev. stage / Exp. condition Nb ESTs Pool 1 Pool 2 Pool 3 Pool 4 Pool 5
Blood cell (red) Omykevn RBC Oncorhynchus mykiss cDNA Unknown 10096
Blood cell (white) Omykevo WBC Oncorhynchus mykiss cDNA Unknown 10352
Brain Brain confinement stress library (rtgb) Unknown 265
  Rainbow trout brain SSH library from warm, cold and hypoxic stress (rtlb) Unknown 2552
  Rainbow trout brain SSH library forward from salinity stress (tcai) Unknown 125
  Rainbow trout brain SSH library reverse from salinity stress (tcaj) Unknown 103
Gill Rainbow trout gill SSH library from bacterial challenge (rtag) Unknown 219
  Rainbow trout gill SSH library forward from salinity stress (tcag) Unknown 203
  Rainbow trout gill SSH library reverse from salinity stress (tcah) Unknown 136
Gonad Oncorhynchus mykiss reproductive Unknown 6247
Head Oncorhynchus mykiss head Unknown 602
Intestine Rainbow trout intestine SSH library reverse from salinity stress (rtricc) Unknown 132
  Rainbow trout intestine SSH library forward from salinity stress (rtricb) Unknown 136
  Rainbow trout intestine SSH library from bacterial challenge (rtai) Unknown 426
  Rainbow Trout Intestine Lambda Zap II Vector library Unknown 266
Kidney Rainbow trout head kidney SSH library from infection (rtay) Unknown 415
  Oncorhynchus mykiss Kidney infected by infectious hematopoietic necrosis virus Unknown 166
Kidney (anterior) and spleen Leuk Unknown 6691
Kidney (head) Rainbow trout head kidney SSH library reverse from confinement stress (tcak) Unknown 145
  Rainbow trout head kidney SSH library forward from confinement stress (tcal) Unknown 118
Larvae (trunk) Rainbow trout larvae (F0DLFKL01) 38 days larvae 355249
  Rainbow trout larvae (FZ8DYKY01) 38 days larvae 359910
Liver Rainbow trout liver SSH library forward from salinity stress (rtrlbz) Unknown 128
  Rainbow trout liver SSH library reverse from salinity stress (rtrlca) Unknown 109
  Liver confinement stress library (rtgl) Unknown 542
  Rainbow trout liver SSH library from warm, cold and hypoxic stress (rtll) Unknown 3082
  Rainbow trout liver SSH library from bacterial challenge (rtal) Unknown 195
Macrophage 12hr LPS Zap Express Library Unknown 1023
Muscle Rainbow trout muscle SSH library from warm, cold and hypoxic stress (rtlm) Unknown 2358
Muscle (white) Rainbow trout white muscle (F0DLFKL02) Adult 207201
  Rainbow trout white muscle (FZNWKMO01) Adult 408818
Oocyte NCCCWA 10RT#1 Unknown 338
  NCCCWA 10RT#2 Unknown 169
  NCCCWA 10RT#3 Unknown 17739
Ovary AGENAE Rainbow trout normalized ovarian library (tcby) Unknown 4918
Pituitary NCCCWA 07RT Unknown 3531
  Pituitary confinement stress library (rtgp) Unknown 166
Pooled NCCCWA 1RT Unknown 47076
  AGENAE Rainbow trout multi-tissues library (tcaa) From embryos to adults 1119
  AGENAE Rainbow trout normalized multi-tissues library (tcad) Unknown 6147
  AGENAE Rainbow trout normalized multi-tissues library (tcac) From embryos to adults 3980
  Tcav From embryos to adults 3366
  Tcay From embryos to adults 26295
  Tcba From embryos to adults 10531
  Tcbk From embryos to adults 26891
  Cadmium exposed rainbow trout subtractive Unknown 341
  NCCCWA 04RT Unknown 2704
  NCCCWA 05RT Unknown 2143
  NCCCWA 03RT Unknown 18078
  NCCCWA 02RT Unknown 18006
  EMB Unknown 3782
  Rainbow trout multi-tissues SSH library from infection (rtax) Unknown 129
  AGENAE Rainbow trout multi-tissues library (tcce) From embryos to adults 7889
  Rainbow trout multi-tissues library (resequencing) (tccn) Unknown 6460
  Characterization of the rainbow trout transcriptome using Sanger and 454-Pyrosequencing approaches Single immature (1-year-old) male double-haploid fish 1298911
Skin Rainbow trout skin SSH library reverse from confinement stress (tcam) Unknown 155
  Rainbow trout skin SSH library forward from confinement stress (tcan) Unknown 125
Testis AGENAE Rainbow trout normalized testis library (tcab) Juveniles 1024
  AGENAE Rainbow trout normalized testis library (tcbi) Unknown 15099
  NCCCWA 09RT Unknown 5155
Unknown Agenae (tcbj) Unknown 196
Whole body Oncorhynchus mykiss Tzenaicut Lake whole Unknown 2456
  Oncorhynchus mykiss Chilliwack River steelhead whole Unknown 4007
 

© 2010 INRA / WTSI / EBI.