Public Sigenae Contig Browser Oyster VennView

                
Based on Ensembl release 40 - Aug 2006
 

Oyster EST Libraries

Venn diagrams are diagrams that show all hypothetically possible logical relations between a finite collection of pools

Define up to five library pools by selecting one or more libraries in each «Pool» column and click on Continue button

Discard singlets

Uncheck below checkboxes to include singlets in analysis of different pools.

Organ / Tissue / Cell type Lib. name Dev. stage / Exp. condition Nb ESTs Pool 1 Pool 2 Pool 3 Pool 4 Pool 5
Digestive gland Oyster exposed to hydrocarbon contamination Adult 240
  Crassostrea gigas digestive gland subtracted library, sensitive line (oygd09) Adult 673
  Crassostrea gigas digestive gland subtracted library, resistant line (oygd10) Adult 689
Digestive gland and gill Pacific oyster exposed to pesticides Adult 137
Digestive gland, mantle, adductor muscle, gill Subtracted libraries from ripe trisomic versus diploid in June Adult 122
Gills Crassostrea gigas gills subtracted library, sensitive line (oypg09) Unknown 268
  Summer mortality gills (fw+rv) (oypg10) Unknown 515
  Summer mortality gills (fw+rv) Crassostrea gigas gills subtracted library, sensitive line (oypg09) Unknown 244
  Pacific oyster Lambda Zap Express gill cDNA library Adult 106
Gills and mantle Subtracted libraries from oysters exposed to temperature challenge Adults 728
Gills, mantle and digestive gland Subtracted libraries from oysters exposed to hypoxia Adults 596
Gonad Crassostrea gigas gonad subtracted library, sensitive line (oyio09) Adult 212
  Crassostrea gigas gonad subtracted library, resistant line (oyio10) Adult 310
Hemocyte C. gigas Hemocytes Lambda Zap Express Library Adult 1142
  ESTs putatively expressed upon LPS stimulation Unknown 172
  Pacific oyster hemocyte library Unknown 2198
  Crassostrea gigas hemocyte subtracted library, sensitive line (oyih09) Adult 123
Mantle-edge Crassostrea gigas mantle edge Unknown 409
  Crassostrea gigas mantle-edge subtracted library, sensitive line (oyge09) Adult 670
  Crassostrea gigas mantle-edge subtracted library, resistant line (oyge10) Adult 673
Mantle-gonad CgG2RSMorest Spat (5 month-old) 137
Muscle Crassostrea gigas muscle subtracted library, resistant line (oypm10) Adult 603
  Crassostrea gigas muscle subtracted library, sensitive line (oypm09) Adult 229
Unknown Pacific oyster 3X3 MPSS QC library Larvae 175
  Pacific oyster 5X5 MPSS QC library Larvae 161
  Pacific oyster 3X5 MPSS QC library Larvae 164
  Pacific oyster 5X3 MPSS QC library Larvae 170
  Crassostrea gigas early developmental stages, D-hinged larvae and spat subtracted libraries Unknown 870
  CDNA-AFLP library from oysters exposed to bacterial challenge (Vibrio tubiashii) Unknown 117
  Cdn37 Unknown 12160
  CDN19 Unknown 1385
  CDN20 Unknown 1444
  CDN21 Unknown 1383

 

© 2010 INRA / WTSI / EBI.